YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7269257, gi\|7...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATKKSLKSR LQDGEKLLGH FLLSFSPELA EIAARAGFDF IVVYLEHGAG GIREALHCIR  60
   61 AIEAAAKKAL DLGPDGIMFP MVETGRSASE AVSFCLYRPD GVRGCAYSVV RDSSFGFNEG 120
  121 YLGNYADKLF IMCQIESEEG MKNVKEIIAV DGMDCVMMGP RDLSASLGLL NDPGNPKVKS 180
  181 VMRVAETAVL ASDPANGGAY LAGMATAQDK TGDLKARGYH VVLGSTDVSL YKKAVVDEVN 240
  241 AFKA

Type	Start	End	Confidence
Signal Peptide	1	30	0.75
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	244	0.99