YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12323056, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLSSTSLS LPKNSHQLHP SSGFSLNPNA RCVSVSFGLN HSNKLHISAP RTKRILTIQS  60
   61 AYRDDDGSGS TGLFVGGFIL GGLIVGALGC VYAPQISKAI AGADRKDLMR KLPKFIYDEE 120
  121 KALEKTRKVL AEKIAQLNSA IDDVSSQLKS EDTPNGAALS TDEIEATA

Type	Start	End	Confidence
Non-Cytoplasmic	1	71	0.71
Transmembrane Helix	72	96	0.76
Cytoplasmic	97	168	0.65