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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110739068, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVQDRVAPK PPKSRIRELP SRDRFAEPKI LDFSSWVSDN VYRIVIIFLF IVTVAAFFFL  60
   61 YNTTDTASLL CFQSQSTQSL QSLTRPQINW NSIQIVSDKT SPYASFRTEK WIVVSVTKHP 120
  121 TEELKGLVKI KGWQVLAIGN SLTPKDWNLK GAIFLSLDAQ AELNYRILDH LPYDSFVRKS 180
  181 VGYLFAIQHG AKKIFDADDR GEVIDGDLGK HFDVELVGED ARQEPILQYS HENPNRTVVN 240
  241 PYIHFGQRSV WPRGLPLENV GEINHEEYYT EVFGGKQFIQ QGISNGLPDV DSVYYSTRKT 300
  301 TFEPFDIRFD EHSPKVALPQ GMMVPVNSFN TLYHSSAFWG LMLPVSVSSM ASDVIRGYWG 360
  361 QRLLWELGGY VAVYPPTVHR YDRVEAYPFS DEKDLHINVG RLIKFLLAWR SNKHRFFETI 420
  421 LDLSFVMAEQ GFWTELDVKF TAAWLQDLLM VGYQQPRLMS LELDRPRATI GHGDRKEFVP 480
  481 RKLPSVHLGV EEIGTVSSEI GNLIKWRKNF GNVVLIMFCN GPVERTALEW RLLYGRIFKT 540
  541 VVILSSRKNS DLYVQEAKLD HIYKRLPKIF DRYSSADGFV FVEDDTVLNY WNLLQADKTK 600
  601 LWTTDKVTES WTTVRPAGNS DWYSVQAELV KKIVSTMPVH FQVNYKEATK NSDGTSLTMC 660
  661 SSEVFYVPKR FVSDFTDLVN LVGDMDLHYK VAVPMFFLSM DSPQNFDPVL GSMVYKSEPA 720
  721 SLNSSLSLYS AEAPAVHPWS ISNEQDFIKL VREMAEGDPL LMELV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle