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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7267971, gi|7...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGRSAFSRT GGFRPENLGQ NAVSLIGSIG FSVLVIGVVV FTIIAATYEP EDPLFHPSDK  60
   61 ITTFLTSNSN ATLKSDDSIV KTGEDFMAAN QTAFGGFINI ADVETSENDS DGNQLDCDTN 120
  121 IPIDCKDPEV FHLMMKATME KFKDSHFYKF GKPVIVEGSS SSCDMAWRYR PKDGKAAAFY 180
  181 KDYRRFVIEK SGNCSVSVMG IGEYHSGVNA RKRKRPGFRN SSGGKVDDFA LPVVGEAVND 240
  241 SLPVVESENV FKEGHYLVYS GGGDRCKSMN HFLWSFLCAL GEAQYLNRTL VMDLTLCLSS 300
  301 VYTLSGQNEE GKDFRFYFDF EHLKEAASML DQVQFWADWG KWYKKNGLKL HLVEDFRVTP 360
  361 MKLVDVKDTL IMRKFGTVEP DNYWYRVCEG ETESVVQRPW NLLWKSKRLM EIVSAIASRL 420
  421 NWDYDAIHIE RGDKARNKEV WPNLEKDTSP SSILSTLQDK IEQGRNLYIA TNEPELSFFN 480
  481 PLKDKYKPHF LDEFKDLWDE SSEWYSETTK LNGGNPVEFD GYMRASVDTE VFLRGKKQIE 540
  541 TFNDLTNDCR DGIGTCNVAA S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle