YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7488260, gi\|3...
Protein type:	Transmembrane
Type Confidence:	0.57
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHHRRLHTI KILIRNSSTT LLFFKIVPIL LHRSGGDSRA LPYTPFFCSL CRNALGHGNV  60
   61 TSEPHIVLLL QCRKKSWCFA SEFEHLKLFK GYIDEDEERH KFGHKGVLVA REEEVQLLKN 120
  121 LSHPNIVRYL GTVRESDSLN IMMQFVPGGS ISSLLAKFGS FPEPKHHNRY LLDNAFISHY 180
  181 KSVKNIHQQS FKIEIDPRKE KKQS

Type	Start	End	Confidence
Cytoplasmic	1	11	0.53
Transmembrane Helix	12	32	0.48
Non-Cytoplasmic	33	204	0.93