YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6729504, gi\|1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAGMFYCAS QASTATANGE RTVTARAIDR HNPIIKDGRR SFTAPCSSGD DYVAPYRQLS  60
   61 KITRVPSSSG DGKSVQVDKG RRSNSGSLMK LISYDVSLAR KSFGCVVATP KTPPGSTRYL 120
  121 LGSDPVSLAG STGQDTVATE ESEASAPKRG SSGPVEEKKK SSGSGSDQAS KVVVLRVSLH 180
  181 CHCRGCQGKV KKHLSKMQGV TSFNIDFASK KVTVTGDITP LEVLGCLSKV KNAQFWTPPP 240
  241 PSIPRANPET

Type	Start	End	Confidence
Signal Peptide	1	17	0.69
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	250	0.99