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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ASPL1_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.63
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSRSAFLLF CVLFLATEET LASLFSSRLI HRFSDEGRAS IKTPSSSDSL PNKQSLEYYR  60
   61 LLAESDFRRQ RMNLGAKVQS LVPSEGSKTI SSGNDFGWLH YTWIDIGTPS VSFLVALDTG 120
  121 SNLLWIPCNC VQCAPLTSTY YSSLATKDLN EYNPSSSSTS KVFLCSHKLC DSASDCESPK 180
  181 EQCPYTVNYL SGNTSSSGLL VEDILHLTYN TNNRLMNGSS SVKARVVIGC GKKQSGDYLD 240
  241 GVAPDGLMGL GPAEISVPSF LSKAGLMRNS FSLCFDEEDS GRIYFGDMGP SIQQSTPFLQ 300
  301 LDNNKYSGYI VGVEACCIGN SCLKQTSFTT FIDSGQSFTY LPEEIYRKVA LEIDRHINAT 360
  361 SKNFEGVSWE YCYESSAEPK VPAIKLKFSH NNTFVIHKPL FVFQQSQGLV QFCLPISPSG 420
  421 QEGIGSIGQN YMRGYRMVFD RENMKLGWSP SKCQEDKIEP PQASPGSTSS PNPLPTDEQQ 480
  481 SRGGHAVSPA IAGKTPSKTP SSSSSYSFSS IMRLFNSLLL LHWLASLM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle