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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7339490, gi|1...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCSYLLSGD ASVVASRRWS DVSSRQRLFL PRQSLRQPSG SSFSRCVRLV ANVNDHFSKQ  60
   61 SLATRNCLAS VFSADLGGSN GNNDNGNGGG GGGDGGGDNS DDSSFDLRYL CFLLLGLSCF 120
  121 FHFRLSAASA IAKDQNSDSN GDAVKETVWE VRGSKRKRLV PDFVKDEFVS EESAFELSSS 180
  181 LTPENLLAQC RNLLTQFLLP EGFPNSVTSD YLDYSLWRGV QGIASQISGV LATQSLLYAV 240
  241 GLGKGAIPTA AAINWVLKDG IGYLSKIMLS KYGRHFDVHP KGWRLFADLL ENAAFGMEML 300
  301 TPVFPQFFVM IGAAAGAGRS AAALIQAATR SCFNAGFASQ RNFAEVYNNF YMALVLITYQ 360
  361 QLFVFLNYSG SLGEAQGMVS KSVGILLGIV VANCIGTSTS LALAAFGVVT TIHMYTNLKS 420
  421 YQCIQLRTLN PYRASLVFSE YLISGQAPLI KEVNDEEPLF PTVRFSNMKS PEKLQDFVLS 480
  481 SEAKAAAADI EERLQLGSKL SDVIHNKEEA IALFDLYRNE GYILTEHKGR FCVMLKESST 540
  541 PQDMLRSLFQ VNYLYWLEKN AGIEPASTYS DCKPGGRLHI SLDYVRREFE HAKEDSESVG 600
  601 WVTEGLIARP LPTRIRLGHD RELLLSSPNS S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle