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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15232180, gi|...
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRAIVRRK NIISDYLNVY ARSIQSFQYI GNSSQTVHSH AYHSGINRPP VETKPVTEHK  60
   61 SFTRRDGLLL LSRNGYFNRS FHGFHSSGFG YGSSEVGPSL GMRYMSLSIR NATTVAAKKP 120
  121 EEEDKKVDEL AKNRKEASPE ECDQAVESLS SVKAKAKAKR LQESKKVARS IVQRAWAIVL 180
  181 KIGPAIKAVA SMNRADWAKK LTHWKHEFVS TLKHYWLGTK LLWADTRISS RLLLKLAGGK 240
  241 SLSRRERQQL TRTTADIFRL VPFAVFILVP FMEFLLPVFL KLFPNMLPST FQDKMKEEEA 300
  301 LKRKLLARIE YAKFLQETAR EMAKEVKHSR TGEVKQTAED LDEFLDKVRR GQIVHNDELL 360
  361 GFAKLFNDEL TLDNISRPRL VSMCKYMGIS PYGTDAYLRY MLRKRLRSIK EDDKLIRAEG 420
  421 VDSLSEAELR EDCRERGMLG LVSVEEMRQQ LRDWMDLSLN HSVPSSLLIL SRAFTVAGRV 480
  481 KAEDAVRATL SSLPDEVVDT VGITSLPSED PVSERRRKLE YLEMQEELIK EEEEKEEEEL 540
  541 TRIKDVKGGD EDKALQEMTI PTASEAQEQA RARVLEQQDD LCKLSRALGV LASASSVCRE 600
  601 REEFLRLVKK EVEFYNTMVE REDVDGEKAA MKAYKAARVD IDQADEVAEA DEVSSALMEK 660
  661 VDGLIQNLEK EIDDVDIKIG KGWQLLDRDR DGKVTPDEVA AAAMYLKDTL ANDGLQQLIS 720
  721 SLSKDKEGRI MVEDIVRLGR LGSKPEENAT EEESS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle