YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GDL73_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMFIIMLMT FSVIACFYAG VGTGEPLVPA LIIMGDSVVD AGNNNRLNTL IKANFPPYGR  60
   61 DFLAHNATGR FSNGKLATDF TAESLGFTSY PVPYLSQEAN GTNLLTGANF ASGASGYDDG 120
  121 TAIFYNAITL NQQLKNYKEY QNKVTNIVGS ERANKIFSGA IHLLSTGSSD FLQSYYINPI 180
  181 LNRIFTPDQY SDRLMKPYST FVQNLYDLGA RKIGVTTLPP LGCLPAAITL FGETGNNNTC 240
  241 VERLNQDAVS FNTKLNNTSM NLTNNLPGLK LVVFDIYNPL LNMAMNPVEN GFFESRRACC 300
  301 GTGTVETSFL CNARSVGTCS NATNYVFWDG FHPSEAANRV IANNLLVQGI PLIS

Type	Start	End	Confidence
Signal Peptide	1	22	0.77
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	354	0.98