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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PEK13_ARATH
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSPTSSPP APSADSAPPP DTSSDGSAAP PPTDSAPPPS PPADSSPPPA LPSLPPAVFS  60
   61 PPPTVSSPPP PPLDSSPPPP PDLTPPPSSP PPPDAPPPIP IVFPPPIDSP PPESTNSPPP 120
  121 PEVFEPPPPP ADEDESPPAP PPPEQLPPPA SSPQGGPKKP KKHHPGPATS PPAPSAPATS 180
  181 PPAPPNAPPR NSSHALPPKS TAAGGPLTSP SRGVPSSGNS VPPPANSGGG YQGKTMAGFA 240
  241 IAGFAVIALM AVVFLVRRKK KRNIDAYSDS QYLPPSNFSI KSDGFLYGQN PTKGYSGPGG 300
  301 YNSQQQSNSG NSFGSQRGGG GYTRSGSAPD SAVMGSGQTH FTYEELTDIT EGFSKHNILG 360
  361 EGGFGCVYKG KLNDGKLVAV KQLKVGSGQG DREFKAEVEI ISRVHHRHLV SLVGYCIADS 420
  421 ERLLIYEYVP NQTLEHHLHG KGRPVLEWAR RVRIAIGSAK GLAYLHEDCH PKIIHRDIKS 480
  481 ANILLDDEFE AQVADFGLAK LNDSTQTHVS TRVMGTFGYL APEYAQSGKL TDRSDVFSFG 540
  541 VVLLELITGR KPVDQYQPLG EESLVEWARP LLHKAIETGD FSELVDRRLE KHYVENEVFR 600
  601 MIETAAACVR HSGPKRPRMV QVVRALDSEG DMGDISNGNK VGQSSAYDSG QYNNDTMKFR 660
  661 KMAFGFDDSS DSGMYSGDYS VQDSRKGSNG ASSEFTRNET ENRNFNNRRY 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle