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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT16_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSTIVLLL FLSFPFISFA ASQAAKTFIF RIDGGSMPSI FPTHYHWYST EFAEESRIVH  60
   61 VYHTVFHGFS AVVTPDEADN LRNHPAVLAV FEDRRRELHT TRSPQFLGLQ NQKGLWSESD 120
  121 YGSDVIIGVF DTGIWPERRS FSDLNLGPIP KRWRGVCESG ARFSPRNCNR KIIGARFFAK 180
  181 GQQAAVIGGI NKTVEFLSPR DADGHGTHTS STAAGRHAFK ASMSGYASGV AKGVAPKARI 240
  241 AAYKVCWKDS GCLDSDILAA FDAAVRDGVD VISISIGGGD GITSPYYLDP IAIGSYGAAS 300
  301 KGIFVSSSAG NEGPNGMSVT NLAPWVTTVG ASTIDRNFPA DAILGDGHRL RGVSLYAGVP 360
  361 LNGRMFPVVY PGKSGMSSAS LCMENTLDPK QVRGKIVICD RGSSPRVAKG LVVKKAGGVG 420
  421 MILANGASNG EGLVGDAHLI PACAVGSNEG DRIKAYASSH PNPIASIDFR GTIVGIKPAP 480
  481 VIASFSGRGP NGLSPEILKP DLIAPGVNIL AAWTDAVGPT GLPSDPRKTE FNILSGTSMA 540
  541 CPHVSGAAAL LKSAHPDWSP AVIRSAMMTT TNLVDNSNRS LIDESTGKSA TPYDYGSGHL 600
  601 NLGRAMNPGL VYDITNDDYI TFLCSIGYGP KTIQVITRTP VRCPTTRKPS PGNLNYPSIT 660
  661 AVFPTNRRGL VSKTVIRTAT NVGQAEAVYR ARIESPRGVT VTVKPPRLVF TSAVKRRSYA 720
  721 VTVTVNTRNV VLGETGAVFG SVTWFDGGKH VVRSPIVVTQ MDTL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle