YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GDU1_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPLSVQSKF EDVATSTSVN HHGVTPQSPW HSPVPYLFGG LAAMLGLIAF ALLILACSYW  60
   61 RLSSSGEEDG QNVDEEKESR SGDKAANGAY EEKFLVIMAG EDLPRYLATP AMKKCTCGGH 120
  121 EGKMVISQEE SVAKEEEKMR EGEEEKVKDT GETTTTSH

Type	Start	End	Confidence
Non-Cytoplasmic	1	35	0.79
Transmembrane Helix	36	57	0.93
Cytoplasmic	58	158	0.80