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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AB19G_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.22
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLSLSGRKI AMTRVSAETQ YITPIGSPTL DELLKDCDSF RKGDSGDGVK SDDPAHHIID  60
   61 VEALYVKPVP YVLNFNNLQY DVTLRRRFGF SRQNGVKTLL DDVSGEASDG DILAVLGASG 120
  121 AGKSTLIDAL AGRVAEGSLR GSVTLNGEKV LQSRLLKVIS AYVMQDDLLF PMLTVKETLM 180
  181 FASEFRLPRS LSKSKKMERV EALIDQLGLR NAANTVIGDE GHRGVSGGER RRVSIGIDII 240
  241 HDPIVLFLDE PTSGLDSTNA FMVVQVLKRI AQSGSIVIMS IHQPSARIVE LLDRLIILSR 300
  301 GKSVFNGSPA SLPGFFSDFG RPIPEKENIS EFALDLVREL EGSNEGTKAL VDFNEKWQQN 360
  361 KISLIQSAPQ TNKLDQDRSL SLKEAINASV SRGKLVSGSS RSNPTSMETV SSYANPSLFE 420
  421 TFILAKRYMK NWIRMPELVG TRIATVMVTG CLLATVYWKL DHTPRGAQER LTLFAFVVPT 480
  481 MFYCCLDNVP VFIQERYIFL RETTHNAYRT SSYVISHSLV SLPQLLAPSL VFSAITFWTV 540
  541 GLSGGLEGFV FYCLLIYASF WSGSSVVTFI SGVVPNIMLC YMVSITYLAY CLLLSGFYVN 600
  601 RDRIPFYWTW FHYISILKYP YEAVLINEFD DPSRCFVRGV QVFDSTLLGG VSDSGKVKLL 660
  661 ETLSKSLRTK ITESTCLRTG SDLLAQQGIT QLSKWDCLWI TFASGLFFRI LFYFALLFGS 720
  721 RNKRT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle