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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7362739, gi|1...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGVFLKMSV VGVSPMIPVG PSSFICAIGG SVEEKSTAAS LPRWVSLRRL RPLEFLRIGG  60
   61 KREEKGTVGS IWKGKRQRSG GGGGGEEDEE EEVAEPKKKE DLCEECDFCR IDDDDEDEEK 120
  121 EKTVFEFSEM LSKIPVEDAQ MFAKLSFLGN LAYSIPKIKP ENLLKYQKLR FVTSSIEKRM 180
  181 SLKVEENNNG EEDEEKKKLI NPAVAYRIAA SAASRLFSHS KSVLPFGSSK RQDNEEASLL 240
  241 ATADSVTAVV AAKEEVKQAV ADDLKSNRSP PCEWFVCDDD KSGTRFFFIQ GSDSLASWQA 300
  301 NLLFEPVPFE DLDVLVHRGI YEAAKGIYEQ MLPEVHAHLN SRGKNRAFLR FSGHSLGGSL 360
  361 SLLVNLMLLI RGQVPASSLL PVITFGSPCI MCGGDRLLQK LGLPKSHLLG ISMHRDIVPR 420
  421 AFSCNYPNRA AKLLKALNGN FRNHPCLNNQ NVLYSPMGKL LILQPSERFS PPHPLLPPGS 480
  481 GLYLLASKNT DETEKSLRAA KILFFNSPHP LEILSDRRSY GSEGKIKRNH DMSSYLKALR 540
  541 HVIRKELKQM KAERDQWLRK FFIINILFSG RDSLKLITRF VASRSSQLVI IFFLPIRLLI 600
  601 MSVYSVVFHH SQAHFSFFK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle