YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GASAE_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSLLSVFI FFHVFTNVVF AASNEESNAL VSLPTPTLPS PSPATKPPSP ALKPPTPSYK  60
   61 PPTLPTTPIK PPTTKPPVKP PTIPVTPVKP PVSTPPIKLP PVQPPTYKPP TPTVKPPSVQ 120
  121 PPTYKPPTPT VKPPTTSPVK PPTTPPVQSP PVQPPTYKPP TSPVKPPTTT PPVKPPTTTP 180
  181 PVQPPTYNPP TTPVKPPTAP PVKPPTPPPV RTRIDCVPLC GTRCGQHSRK NVCMRACVTC 240
  241 CYRCKCVPPG TYGNKEKCGS CYANMKTRGG KSKCP

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	275	0.99