YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	THF1_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATAISSLS FPALGQSDKI SNFASSRPLA SAIRICTKFS RLSLNSRSTS KSLIHCMSNV  60
   61 TADVPPVSET KSKFLKAYKR PIPSIYNTVL QELIVQQHLM RYKKTYRYDP VFALGFVTVY 120
  121 DQLMEGYPSD QDRDAIFKAY IEALNEDPKQ YRIDAQKMEE WARSQTSASL VDFSSKEGDI 180
  181 EAVLKDIAGR AGSKEGFSYS RFFAVGLFRL LELASATDPT VLDKLCASLN INKKSVDRDL 240
  241 DVYRNLLSKL VQAKELLKEY VEREKKKQGE RAQSQKANET ISKCLGDTLY NPSFLVERKS 300
  301

Type	Start	End	Confidence
Signal Peptide	1	15	0.88
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	300	0.99