YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25287641, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSSSARSSG SDSLMSSMAT CALSVKTFTL SELEKATDRF SAKRVLGEGG FGRVYQGSME  60
   61 DGTEVAVKLL TRDNQNRDRE FIAEVEMLSR LHHRNLVKLI GICIEGRTRC LIYELVHNGS 120
  121 VESHLHEGTL DWDARLKIAL GAARGLAYLH EDSNPRVIHR DFKASNVLLE DDFTPKVSDF 180
  181 GLAREATEGS QHISTRVMGT FGYVAPEYAM TGHLLVKSDV YSYGVVLLEL LTGRRPVDMS 240
  241 QPSGEENLVT WARPLLANRE GLEQLVDPAL AGTYNFDDMA KVAAIASMCV HQEVSHRPFM 300
  301 GEVVQALKLI YNDADETCGD YCSQKDSSVP DSADFKGDLA PSDSSWWNLT PRLRYGQASS 360
  361 FITMDYSSGP LEDMENRPHS ASSIPRVGGL ILPNRSGPLR PMRSRRNFFR LRGSMSEHGG 420
  421 PSSSRHLWSG NGDWL

Type	Start	End	Confidence
Signal Peptide	1	31	0.82
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	435	0.99