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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2832625, gi|7...
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFFASISTL RKLLLVEDEK VWLLHQIKEK EAGKLDRGYV ATVNSKEIKK VGKKEHHLWK  60
   61 KNDSAGSGQK ALNLVRMLSG LPNEKEAVYG ALNKWVAWEV EFPIIAAAKA LQILRKRSQW 120
  121 HRVIQLAKWM LSKGQGATMG TYDILLLAFD MDERADEAES LWNMILHTHT RSIPRRLFAR 180
  181 MIALYAHHDL HDKVIEVFAD MEELKVSPDE DSARRVARAF RELNQEENRK LILRRYLSEY 240
  241 KYIYFNDQSL SSSSSRSLSF RIRVEMARVC VMMMAMAIAM AMNIAMGDPI APCYFIFGDS 300
  301 LVDSGNNNRL TSLARANYFP YGIDFQYGPT GRFSNGKTTV DVITELLGFD DYITPYSEAR 360
  361 GEDILRGVNY ASAAAGIREE TGRQLGARIT FAGQVANHVN TVSQVVNILG DENEAANYLS 420
  421 KCIYSIGLGS NDYLNNYFMP VYYSTGSQYS PDAYANDLIN RYTEQLRIMY NNGARKFALV 480
  481 GIGAIGCSPN ELAQNSRDGV TCDERINSAN RIFNSKLVSL VDHFNQNTPG AKFTYINAYG 540
  541 IFQDMVANPS RYGFRVTNAG CCGVGRNNGQ ITCLPGQAPC LNRDEYVFWD AFHPGEAANV 600
  601 VIGSRSFQRE SASDAHPYDI QQLARL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle