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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7486085, gi|7...
Protein type: Transmembrane
Type Confidence: 0.53
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGVLAGDCS FGESGVSSYS RNSNEKQDEV ARWYFGRKEI EENSPSRLDS IDLKKETYLR  60
   61 KSYCTFLQDL GMRLKVTVLR LLLSPFSMLS SLLTQTIATV CMFLAGKVEE TPRPLKDVIV 120
  121 VSYEIIHKKD PTTAQKIKQK EVYEQQKELI LNGEKIVLST LGFDFNVYHP YKPLVEAIKK 180
  181 FKVAQNALAQ VAWNFVNDGL RTSLCLQFKP HHIAAGAIFL AAKFLKVKLP SDGEKVWWQE 240
  241 FDVTPRQLED VSNQMLELYE QNRVPASQVS EVESSVGGGS AHHVGSRPSA RLTHEHSNSD 300
  301 NLGGSTKATQ NRSNDNGSGE AGSVITEQKG ERDTETKDSM HTESHPAHKS RSGVEAPGED 360
  361 KIEKAGAHFP EDDKSRIVGT ADVTVSQSPK DIKMFRDKVK AKLEAKKVQG EKTRKKDLVD 420
  421 EDDLIERELE DVELAVEDDK DIQNKSSMGT EHGEILDGNN LVVNTEEGEM IDDVSSTMPS 480
  481 RKRKMESPCE KQLGEGKRRH DNSENVEEGQ KTNPGGSSHS YGDREPRRHS QER

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle