YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CYB5D_ARATH
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGDGKVFTL SEVSQHSSAK DCWIVIDGKV YDVTKFLDDH PGGDEVILTS TGKDATDDFE  60
   61 DVGHSSTAKA MLDEYYVGDI DTATVPVKAK FVPPTSTKAV ATQDKSSDFV IKLLQFLVPL 120
  121 LILGLAFGIR YYTKTKAPSS

Type	Start	End	Confidence
Cytoplasmic	1	110	0.54
Transmembrane Helix	111	132	0.79
Non-Cytoplasmic	133	140	0.63