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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7268785, gi|5...
Protein type: Globular with Signal Peptide
Type Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRSRRSRSR HGAQACAVMS AVLLLASVSL LYTRLSLFSS HSPNHLRSGS SEDTVLFPDS  60
   61 VLVSDSDVET TGGGGRGSTT STEDRIDEHD DAIEDDGVSN EEDENQDAEQ EQEVDLNRNK 120
  121 AASSSGFYFD HVNGVIRRAF NKRSIDEWDY DYTGFSIDSD SSGDKSSRAA FGSDDVPLDE 180
  181 SIRRKIVEVT SVEDALLLKS GKKVSPLRQG WGDWFDKKGD FLRRDRMFKS NIETLNPLNN 240
  241 PMLQDPDSVG NTGLTRGDKV VQKWRLNQIK RNPFMAKKPL SVVSEKKEPN EFRLLSSVGE 300
  301 IKRGERKTLD NDEKIEREEQ KNVESERKHD EVTEHMYADG TKWGYYPGIE PSLSFSDFMD 360
  361 SFFRKEKCSM RVFMVWNSPG WMFSVRHQRG LESLLSQHRD ACVVVFSETV ELDFFRNSFV 420
  421 KDSYKVAVAM PNLDELLQDT PTHVFASVWF DWRKTKFYPT HYSELVRLAA LYKYGGVYLD 480
  481 SDVIVLGSLS SLRNTIGMED QVAGESLNGA VMSFEKKSPF LLECLNEYYL TYDDKCLRCN 540
  541 GADLLTRVAK RFLNGKNRRM NQQELNIRPS SVFFPINSQQ ITNYFAYPAI EDERSQQDES 600
  601 FKKILNESLT FHFWNSVTSS LIPEPESLVA KLISSDHESS DLSLPSSPSS SPSQCLVKSV 660
  661 CSLVCTSYLR QNHVVSSPHR VNLDFDANSL THEQAITVVA SLASESGSMV ALCFFYWAVG 720
  721 FEKFRHFMRL YLVTADSLLA NGNLQKAHEV MRCMLRNFSE IGRLNEAVGM VMDMQNQGLT 780
  781 PSSITMNCVL EIAVELGLIE YAENVFDEMS VRGVVPDSSS YKLMVIGCFR DGKIQEADRW 840
  841 LTGMIQRGFI PDNATCTLIL TALCENGLVN RAIWYFRKMI DLGFKPNLIN FTSLIDGLCK 900
  901 KGSIKQAFEM LEEMVRNGWK PNVYTHTALI DGLCKRGWTE KAFRLFLKLV RSDTYKPNVH 960
  961 TYTSMIGGYC KEDKLNRAEM LFSRMKEQGL FPNVNTYTTL INGHCKAGSF GRAYELMNLM1020
 1021 GDEGFMPNIY TYNAAIDSLC KKSRAPEAYE LLNKAFSCGL EADGVTYTIL IQEQCKQNDI1080
 1081 NQALAFFCRM NKTGFEADMR LNNILIAAFC RQKKMKESER LFQLVVSLGL IPTKETYTSM1140
 1141 ISCYCKEGDI DLALKYFHNM KRHGCVPDSF TYGSLISGLC KKSMVDEACK LYEAMIDRGL1200
 1201 SPPEVTRVTL AYEYCKRNDS ANAMILLEPL DKKLWIRTVR TLVRKLCSEK KVGVAALFFQ1260
 1261 KLLEKDSSAD RVTLAAFTTA CSESGKNNLV TDLTERISRG VG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle