YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7270376, gi|4...
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKSSFFVH FSCLLLLLTI IITCGEGVRN PVRPRSSERR ALMDGQDLSR PLKLTFGGPS  60
   61 RNWTDAIPIG NGRLGATIWG GVSSEILNIN EDTIWTGVPA DYTNQKAPEA LAEVRRLVDE 120
  121 RNYAEATSEA VKLSGQPSDV YQIVGDLNLE FDSSHRKYTQ ASYRRELDLE TAVAKVSYSV 180
  181 GAVDFSREFF ASNPDQVIIA KIYASKPGSL SFKVSFDSEL HHHSETNPKA NQILMRGSCR 240
  241 PKRLPVNLKK SINATNIPYD DHKGLQFASI LEVRVSNGGS VSSLGGKKLS VEKADWAVLL 300
  301 LAASSNFDGP FTMPVDSKID PAKECVNRIS SVQKYSYSDL YARHLGDYQK LFNRVSLHLS 360
  361 GSSTNETVQQ ATSTAERVRS FKTDQDPSLV ELLFQYGRYL LISSSRPGTQ VANLQAFVVS 420
  421 LTPLLLLRYC SGAPHLNINL QMNYWHSLPG NIRECQEPLF DYMSALAING RKTAQVNYGA 480
  481 SGWVAHQVSD IWAKTSPDRG EAVWALWPMG GAWLCTHAWE HYTYTMDKEF LKKKGYPLLE 540
  541 GCTSFLLDWL IKGKDGFLQT NPSTSPEHMF TAPIGKPASV SYSSTMDIAI IKEVFADIVS 600
  601 ASEILGKTND TLIGKVIAAQ AKLPPTRISK DGSIREWAED FEDPEVHHRH VSHLFGLFPG 660
  661 HTITVEKSPE LAKAVEATLK KRGEEGPGWS TTWKAALWAR LHNSEHAYRM VTHIFDLVDP 720
  721 LNERNYEGGL YSNMFTAHPP FQIDANFGFA AAVAEMLVQS TTKDLYLLPA LPADKWPNGI 780
  781 VNGLRARGGV TVSIKWMEGN LVEFGLWSEQ IVSTRIVYRG ISAAAELLPG KVFTFDKDLR 840
  841 CIRTDKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle