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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25406422, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTTSSVRVR LAFVALLSAT TFYCIHKYRR LKHLKNLSLN PSSTLKASRG KIFFISQTGT  60
   61 AKALAQRLHE LCASNDIAFD IVDPHSYEPE DLPKETLVLF IASTWDGGKP PKNGEFLVNW 120
  121 LGESAEDFRV GSLLLSDCKF AVFGVGSRAY GESYNAVAKE LSSRMIGLGG LEMIPVGEGD 180
  181 VDDGELDRAF QDWCDGVIRV LKGGSAQETN GVSQQIGAVE DDLEYYDSTD EEDEDNDADG 240
  241 GIVDLEDIAG KAPSKRNGVV KVTKVDGKKE MVTPVIRASL TKQHDFYLLQ GYKIIGSHSG 300
  301 VKICRWTKSQ LRGRGGCYKH SFYGIESHRC METTPSLACA NKCVFCWRHH TNPVGKSWQW 360
  361 KMDEPSVIVK GALDLHKNMI KQMKGVPGVT PEKLQEGLNP RHCALSLVGE PIMYPEINAL 420
  421 VDELHGRRIS TFLVTNAQFP EKILMMKPIT QLYVSVDAAT KESLKAIDRP LFADFWERFI 480
  481 DSLKALQEKQ QRTVYRLTLV KGWNTEELDA YFNLFSIGKP DFIEIKGVTY CGSSATSKLT 540
  541 MENVPWHTDV KAFSEALSLK SNGEYEVACE HAHSCCVLLG RTEKFKVDGK WFTWIDYEKF 600
  601 HDLVASGEPF TSTDYMAQTP SWAVYGAQEG GFDPGQLRYK KERNHPPKPQ AVLA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle