YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRR38_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLKRIVWF PILAIAIQIL SIHTVLSQSQ NNAFLFHKCS DIEGSFTSKS LYESNLNNLF  60
   61 SQLSYKVPST GFAASSTGNT PNNVNGLALC RGDASSSDCR SCLETAIPEL RQRCPNNKAG 120
  121 IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN 180
  181 QKLFATGEKN IGKNKLYGLV QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN 240
  241 FRYEIYPFVK TA

Type	Start	End	Confidence
Signal Peptide	1	27	0.60
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	252	0.99