YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91806610, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMILMTTMQ NAFWILLVFS ISMASCSTIP SLVGPQIGIN YGEYSSNLED SSPVIGINYG  60
   61 RYGSNLPPPE AIPSLVNSLS IKHVKTFDLD PRITKSFANT GITLSLCIPN DKIPSLATNL 120
  121 SEAESIIRNF ILPYHKNTII TAISVGNEVS LLPQFSNHLV SAMVNVHKAI KRYRLHKKIK 180
  181 VSTTHSLAIL SRRFPPSTAV FHQSIGDSVL EPLIRFLQRT NSPLMVNVYP YLAYKQSFPS 240
  241 IPLDFALFQP MNSPRRRRYI DPYTGVAYTN LFDIMLDSVD SAVKSLGLPE IPVVVSEIGW 300
  301 PTRGDPGETA ANLENARVFN QRLVEHLRRR WNKVPVYIFA LFDEDQKTGN AVEKHWGLLY 360
  361 GNGSRKYDLN FSPPI

Type	Start	End	Confidence
Signal Peptide	1	26	0.73
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	375	0.98