YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110741179, gi...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRARLVVFPI KGKKWCFSRS VDPFAAQSPS GVTPTTVRGL WKKISSESKP INANAELLVD  60
   61 FISDKMNKAW VGLEKAPDGS IKNKIHGFGL KLLARVKPSE IFLKSISKEV TSVQVTYPPS 120
  121 LDPRLVRRRL RHIAMSGTIL HKKYLVGSVT LLPLTSAFMV LPLPNIPFFW VLFRTYSHWR 180
  181 ALQGSEKLLK LISNEANPDK PDSTDDADES KNSNTKPEQK SQSPTCILLP SEELYQLIRE 240
  241 ASEEGLDEAT IIEICKSFDL NKNDVLKYRN LV

Type	Start	End	Confidence
Cytoplasmic	1	143	0.72
Transmembrane Helix	144	164	0.69
Non-Cytoplasmic	165	272	0.79