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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7572912, gi|1...
Protein type: Transmembrane
Type Confidence: 0.67
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLTTNDLFA SQPLFHCPCS SSSRPRRRRF YGLHFPINLT SEKNNSLSIV ALSDSDLPSR  60
   61 TAFSRRAFLL APPLLVSAAS LFLKPSVSLA SEESSSATVT SPAESAAPPP PPATTTPSPP 120
  121 PPVNKEETIT SRIYDATAIG EPMAMGKDKK KVWEKLLNAR VVYLGEAEQV PTKDDKELEL 180
  181 EIVRNLRKRC VESERQISVA LEAFPLDLQD QLNQYMDKRM DGETLKSYVT HWPAQRWQEY 240
  241 EPLLSYCRDN SVRLIACGTP LKVLRTVQAE GIRGLSKSER KLYTPPAGSG FISGFSSFSR 300
  301 RSTFDMSLPT QIVPFGPSSY LSAQARVVED HTMSQVILQA VADGGGTGLL LVVTGASHVE 360
  361 YGSRGTGLPA RISRKFPKKN QVVVLLDPER QFLRREGETP VADFLWYSAA RPCSRNCFDR 420
  421 AEIARVMNAA GRRRDALPPN DGNLFHAFQD IQNGLDLGLV SPEVLQNLFD LEQYPLISEL 480
  481 TQRFQGFRER LLADPKFLNR LAIEEAISIT TTLIAQYEKR KENFFEEIDY VITDTVRGSV 540
  541 VDFFTVWLPA PTLSFLSYAD ETTGPDSIDA LRGLLGSIPD NAFQKSLAGR EWNLNLRIAS 600
  601 VIVGGLKLAG VGVVSSFAAV GASNALNIAR KVIKPELVVA EKPKRSPLLK TAMVYGGFLG 660
  661 TSANLRYQII AGLIEHRLSD ELSSQPLLVN AISFVVRTLN SYFGTQQWID LARSTGLQTQ 720
  721 KSIPASKEIS EALEEPTVEC DTTTEEESID KLNNQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle