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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4678259, gi|7...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGFLTDQQR EMMKVATQTA DDLPPSQKPH SVLLEHLPKP SGGGKASGAS NAVKHRRSHA  60
   61 GRSIRSKKDG GGGKGNWGKL IDTDGDYHID PNDPNYDSGE EPFELVGATL SDPLDDYKKA 120
  121 AASIINEYFS TGDVDVAAAD LIELGSSEYH PYFIKRLVSV AMDRHDKEKE MASVLLSALY 180
  181 ADVINPNQIR DGFVLLLESA DDFVVDIPDA VNVLALFLAR AVVDDILPPA FLPRAAKALP 240
  241 ITSKGYQVVQ TAEKSYLSAA HHAELVERRW GGQTRTTVEE VKKKIADILN EYVETGETYE 300
  301 ACRCVRELGV SFFHHEVVKR ALVTALENHA AEAPVLKLLN EAASENLISS SQMVKGFSRL 360
  361 RESLDDLALD IPSARTKFGL IVPKAVSGGW LDASFGYPSG ECGRQQNEDE KLKRFKEDIV 420
  421 TIIHEYFNSD DIPELIRSLE DLGAPEYNPI FLKKLITLAL DRKNHEKEMA SVLLSSLHIE 480
  481 MFTTEDVADG FVMLLESAED TALDILDASN ELALFLARAV IDDVLAPFNL EEISSKLRPN 540
  541 SSGTETVKMA RSLIFARHAG ERLLRCWGGG SGWAVEDAKD KISNLLEEYE SSGLVSEACK 600
  601 CIHELGMPFF NHEVVKKALV MGMEKKKDKM MLDLLQESFS EGLITTNQMT KGFTRVKDGL 660
  661 EDLALDIPNA KEKFNDYVEY GKKNETTRKG SLEANMKFVI PKLPFTLSLF LSLSFLIIFL 720
  721 FAFPTTFLRR PLSSSSSVTS VADEGIRIRH HGYSSYEAYI KHQLNKTQNP KLRKVWTTRD 780
  781 WDRKVRVFST FFRRLSDRGL LSNQSKALSI GARVGQEVAA LRLIGVEDSV GIDLVPRPPL 840
  841 VVKGDFHAQP FDEETFDFEF SNVFDHALYP EKFVGEIERT LKPGGVCVLH VSISGKTDKY 900
  901 SANDLLSVKP LVKLFKRSKV VEMRKIDGFG LDTEIVFRKN MN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle