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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3021268, gi|7...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSDADASTS SSSIDIMPSA NIQNDVPEPS VHTSHRRTRK PAYLQDYYCH SVASLTIHDI  60
   61 SQFLSYEKVS PLYHSFLVCI AKAKEPSTYN EAKEFLVWCG AMDDEIGAME TTHTWEICTL 120
  121 PPNKKPIGCK WVYKIKYNSD GTIERYKARL VAKGYTQQEG IDFIETFSPV CKLTSVKLIL 180
  181 AISAIYNFTL HQLDISNAFL NGDLDEEIYM KLPPGYAARQ GDSLPPNAVC YLKKSIYGLK 240
  241 QASRQWFLKF SVTLIGFGFV QSHSDHTYFL KITATLFLCV LVYVDDIIIC SNNDAAVDEL 300
  301 KSQLKSCFKL RDLGPLKYFL GLEIARSAAG INICQRKYAL DLLDETGLLG CKPSSVPMDP 360
  361 SVTFSAHSGG DFVDAKAYRR LIGRLMYLQI TRLDISFAVN KLSQFSEAPR LAHQQAVMKI 420
  421 LHYIKGTVGQ GLFYSSQAEM QLQVFSDASF QSCKDTRRST NGYCMFLGTS LISWKSKKQQ 480
  481 VVSKSSAEAE YRALSFATDE MMWLAQFFRE LQLPLSKPTL LFCDNTAAIH IATNAVFHER 540
  541 TKHIESDCHS VRERSVYQAT LSYSFQAYDE QDGFTEYLSP ILRGTIMYIV SMFGLAGLEA 600
  601 LICFIFLFLF SFLTSFKASA QNPFYLNHDC PNRTTYSSNS TYSTNLKTLL SSFASRNASY 660
  661 STGFQNIRAG QTPDRVTGLF LCRGDLSPEV CSNCVAFSVN ESLTRCPNQR EAVFYYEECI 720
  721 LRYSHKNFLS TVTYEGELIM RNPNNISSIQ NQRDQFIDLV QSNMNQAANE AANSSRKFST 780
  781 IKTELTSLQT LYGLVQCTPD LARQDCFSCL TSSINRMMPL FRIGARQFWP SCNSRYELYA 840
  841 FYNETAIGTP SPPPLFPGST PPLTSPSIPA LVGYCFLAQR TKKTFDTASA SEVGDDMATA 900
  901 DSLQLDYRTI QTATNDFAES NKIGRGGFGE VYKGTFSNGK EVAVKRLSKN SRQGEAEFKT 960
  961 EVVVVAKLQH RNLVRLLGFS LQGEERILVY EYMPNKSLDC LLFDPTKQTQ LDWMQRYNII1020
 1021 GGIARGILYL HQDSRLTIIH RDLKASNILL DADINPKIAD FGMARIFGLD QTQDNTSRIV1080
 1081 GTYGYMAPEY AMHGQFSMKS DVYSFGVLVL EIISGRKNSS FDESDGAQDL LTHTWRLWTN1140
 1141 RTALDLVDPL IANNCQNSEV VRCIHIGLLC VQEDPAKRPT ISTVFMMLTS NTVTLPVPRQ1200
 1201 PGFFIQSSPV KDPTDSDQST TTKSTPASID DELITDLYPR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle