YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|11288305, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNIDLIGMS NRDLIGMSNS ELLTVEPLDL QFPFELKKQI SCSLYLTNKT DNNVAFKVKT  60
   61 TNPKKYCVRP NTGVVLPRST CEVLVTMQAQ KEAPSDMQCK DKFLLQGVIA SPGVTAKEVT 120
  121 PEMAGHRVEE TKLRVTYVAP PRPPSPVHEG SEEGSSPRAS VSDNGHGSEF SRFIVDNKAG 180
  181 HQENTSEARA LITKLTEEKQ SAIQLNNRLQ RELDQLRRES KKSQSGGIPF MYVLLVGLIG 240
  241 LILGYIMKRT

Type	Start	End	Confidence
Non-Cytoplasmic	1	225	0.69
Transmembrane Helix	226	247	0.93
Cytoplasmic	248	250	0.65