YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HR2_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLTEIIAGA ALGLALQILH EAIQRAKDRS LTTSCILDRL DSTILRITPL MAKVEKLNKE  60
   61 SDESLRKVFE DLKHLLEKAV VLVEAYAELK RRNLLGKYRY KRRIKELEGS LKWMVDVDVK 120
  121 VNQWADIKDL MAKMSEMNTK LEKIMGQPID CIISEDNTNM DIVERVDPSL EAKAGCSNSD 180
  181 SKPKIDIHLR WSKQSKDHGI RFVLN

Type	Start	End	Confidence
Signal Peptide	1	22	0.75
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	205	0.98