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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12325092, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVLLPLCLI ISMFTYSNAA YCLCKEGNEQ VLQKAIDYAC GNGADCTQIQ PTGACYQPNT  60
   61 VKNHCDVAVN SYYQKKASSG ATCDFNGAAS PSTTPPSTAS NCLTGSSSSG TPTTGTPTTG 120
  121 TPTSGTPTTG TPTTGTPTTG TPTSGTPTSG FPNTGTPNTG TNTGMPNSNG MPTSSSSSVF 180
  181 PGTTLGPTGS GGLGDPNAGE KLMFRKTLNS ISRRHFSSSS PESPSLYSFL KPSLFSHKPI 240
  241 TLSPSLSPPQ NPKTLTPDQK SSFESTLHDS LNAHYTDEAW KAFRSLTAAS SLPEKRLINS 300
  301 LITHLSGVEG SGESISHRLK RAFASAAYVI EKDPILLEFE TVRTLLESMK LAKAAGPALA 360
  361 LVKCMFKNRY FVPFDLWGHL VIDICRENGS LAPFLKVFKE SCRISVDEKL EFMKPDLVAS 420
  421 NAALEACCRQ MESLADAENV IESMAVLGVK PDELSFGFLA YLYARKGLRE KISELENLMD 480
  481 GFGFASRRIL YSNMISGYVK SGDLDSVSDV ILHSLKEGGE ESSFSVETYC ELVKGFIESK 540
  541 SVKSLAKVIL EAQKLESSYV GVDSSVGFGI INACVNLGFS DKAHSILEEM IAQGGGSVGI 600
  601 GVYVPILKAY CKEYRTAEAT QLVTEISSSG LQLDVEISNA LIEASMTNQD FISAFTLFRD 660
  661 MRENRVVDLK GSYLTIMTGL LENQRPELMA AFLDEVVEDP RVEVNSHDWN SIIHAFCKSG 720
  721 RLEDARRTFR RMVFLRYEPN NQTYLSLING YVSGEKYFNV LLLWNEIKGK ISSVEAEKRS 780
  781 RLDHALVDAF LYALVKGGFF DAAMQVVEKS QEMKIFVDKW RYKQAFMETH KKLRLPKLRK 840
  841 RNYKKMESLV AFKNWAGLNT 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle