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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12321837, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRTVALPLS HDLNVHKIHE ASGFHNSAAG KNRVYLTRTG LSSCATRQDV WSLQLLESLS  60
   61 GSIVPVSSRC NAFVCRSALS PGNGNEGPIL KSTAVIFTRV YDALGGNPHL VKLIPAVGIL 120
  121 AFATWGLRPL LRLARTTLFE GNDANSQKSS TQYIVVSYLQ PLLLWSGAIL LCRTLDPIVL 180
  181 PSSAGQAIKQ RLLIFARSIS TVLAFSCCLS SLLQQVQKFF METNNPADTR NMGFSFAGKA 240
  241 VYTAAWVAAA SLFMELLGFS TQKWLTAGGL GTVLLTLAGR EILTNFLSSI MIHATRPFVL 300
  301 NEWIQTKIGG YEVSGTVEQV GWWSPTIIRG DDREAVHIPN HQFSVNIVRN LTQKTHWRIK 360
  361 THLAISHLDV SKINNIVADM RKVLSKNPQI EQQKIHRRVF LEDIDPENQA LRILISCFVK 420
  421 TSRFEEYLCV KEAVLLDLLT VIRHHGARLA TPIRTVQRMR NEAEVDTAGF SDIVFNQAAM 480
  481 NRRYMLIEPS YKINSDDNSK SPSPSPGQKS PSPGQKSEER DLQEEPSETK AETENNGSVP 540
  541 VSNAKKENQK AALGSNSNTG TKGSSTSTSD QPVAQKSEEK KKESVGDPHK AEKDEVSDDE 600
  601 ATIEQTLKSK AKQGSEKNNG ESKARDGGGS GTSSLLEENL VLGVALDGSK RTLPIDEEHK 660
  661 ASGALMDSEE LGIGSE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle