YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20260026, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENPGGRRRR DIAITDGERT TGSSVVAATV AAVAVVGPLF GLMSFSFVAT VTLFLIASPL  60
   61 LLIFAPAFMV TVAVLVSAMV GVGVAAAMWM MGIAALVCCG REIGIETGLA GRMVESVVRE 120
  121 LGYGRSRYLR DKSEDSYSTS SPSSRDYSSS

Type	Start	End	Confidence
Cytoplasmic	1	20	0.86
Transmembrane Helix	21	42	0.89
Non-Cytoplasmic	43	59	0.43
Transmembrane Helix	60	93	0.76
Cytoplasmic	94	150	0.57