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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7486115, gi|7...
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLSRRFAQV SSDEEDDVPI TRSKGRNSAS PEESLGKRRK RKTVKLYEDF EEKEADRKKK  60
   61 RKGNKEDEDM AEGDDDQAEE ETNPEAEEEE DEEEEEKPDD ACPVGDSVNV TGKGKGKRTH 120
  121 FNQFAYDGNT YDLGFLVVDL ELRFGLRFFF TIESALLAAI TLLWILKSRK LLSITGLIRS 180
  181 WLLSFVEHPL LCQRNVSLSL MLFRFLVLTA PCLETSEEVP VLLVPEDKSQ KPYVAIIKVL 240
  241 DITQTKDGSM MILGQWFYRP EEAEKRGGGN WQSSDTRELF YSFHRDEVPA ESVMHRCVVY 300
  301 FVPAHKQLPK RKNNPGFIVR KVYDTVEKKL WKLTDKDYED SKQREIDVLV KKTMNVLGDL 360
  361 PDLESEDMLV DQENVLKAKR SFRKVNISPV DVRREEDASL KAETPGSGAG ISSEHYAILE 420
  421 KFDSLTGDAH RDKCLGKLLE AVQHICYIPE NKQAGDEAKD EKFLWPDAAV PQVCALENAS 480
  481 HASLASDFQK YNQKMRTLVF NLKNTALLAR RLLNGELEPA TILNMSPTEL KEGLTADETT 540
  541 KKEPDDADRM QMTSVRCSRC SQLTVGLRDI IQAGHGDRYQ LECVDCGYSW YASRDEVSTL 600
  601 TIVTDKPAQG TEKEDIEKNL TSPRETNKPK DEALKTNDSN ADNNPEASKK PE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle