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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: UGDH3_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKICCIGAG YVGGPTMAVI ALKCPSVEVA VVDISVPRIN AWNSDQLPIY EPGLDDVVKQ  60
   61 CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA ADLTYWESAA RMIADVSVSD 120
  121 KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIEDLFM PDRVLIGGRE 180
  181 TTEGFAAVKA LKDIYAQWVP EERILTTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT 240
  241 GANVSEVSYA VGKDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI 300
  301 KINDYQKTRF VNRIVSSMFN TVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLGDKARL 360
  361 SIYDPQVTEE QIQRDLTMNK FDWDHPLHLQ PMSPTTVKQV SVAWDAYTAT KDAHGICILT 420
  421 EWDEFKKLDF QRIFENMQKP AFVFDGRNVV DADKLREIGF IVYSIGKPLD QWLKDMPALA 480
  481 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle