YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7649373, gi\|4...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEKECEHHH DEDEKMRKRI GALVLGFLAA VLFVVFLVWA ILHPHGPRFV LQDATIYAFN  60
   61 VSQPNYLTSN LQVTLSSRNP NDKIGIFYDR LDIYASYRNQ QVTLATLLPA TYQGHLDVTI 120
  121 WSPFLYGTTV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWVSGR YRLHVNCPAY 180
  181 ITLAGHFSGD GPAVKYQLVQ RCAVDV

Type	Start	End	Confidence
Cytoplasmic	1	20	0.97
Transmembrane Helix	21	42	0.96
Non-Cytoplasmic	43	206	0.85