YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4586103, gi\|7...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGFTLLPSR LLAFPSRALP RRLHHHHAKL ILRCKMSSSS SSLTQSITLP SQPNEPVLVS  60
   61 ATAGISSSDF RRVLDIRGFP LNWLRNLESE SGILADGSMT LKQVLIQGVD MFGKRIGFLK 120
  121 FKADIFDKET GQKVPGIVFA RGPAVAVLIL LESDGETYAV LTEQVRVPTG KIVLELPAGM 180
  181 LDDDKGDFVG TAVREVEEEI GIKLKKEDMV DLTAFLDPST GYRIFPSPGG CDEEMSVFLY 240
  241 RGQVEKETIR QLQGKETGLR EHGEFIKVRL IPYRELWRKT ADAKVLMSIG LYEMAQREGL 300
  301 VSSQRLKPNS

Type	Start	End	Confidence
Signal Peptide	1	18	0.81
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	310	0.99