YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52354359, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTAGKEDLG TADTAEAQYV MAKTSVWWDI ENCQVPKGLD AHGIAQNISS ALKKMNYCGR  60
   61 VSISAYGDTS GIPHVIQHAL NSTGIELHHV PAGVKDASDK KILVDMLFWA FDNPAPSNIM 120
  121 LISGDRDFSN ALHKLSLRRY NILLAHPPKA SAPLSQAATT VWLWTSLLAG GNPLIRGKVK 180
  181 TSQLVANAST SSNVMSSPPH NQFPDPPRSG PLHARQPYLN PDPFVNNRDP NAARPGPSNM 240
  241 RPLCPNAIRR HRQEKLERAL PLLILLVFMF MILATVNSN

Type	Start	End	Confidence
Cytoplasmic	1	258	0.85
Transmembrane Helix	259	276	0.97
Non-Cytoplasmic	277	279	0.71