YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRR41_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSVFGSVHI LAMIAIQLLL THSVSSLNLT NAYLHHKCSN TQGKYKQGSA FEKNLNLVLS  60
   61 TITSIGNFRD GFRYTEEGED PNNVFVMFQC RGDSYWSKCP PCISTAVSGL RRRCPRNKGA 120
  121 IIWYDQCLLK ISSVASFNKI DYENDFYLSN PNNMSDRGLF NKETSALLEK LAYKASDRNN 180
  181 LDGKQLVLYA AGEKRIGTKK VYAMVQCTKD LIFTKCFECL EGILRKFPQC CDGKRGGRVF 240
  241 GTSCNFRYEL YPFLRNYSNS TMRAPY

Type	Start	End	Confidence
Signal Peptide	1	26	0.96
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	266	0.99