YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25404681, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWWMMGENGG HYCSKKSDDL CGTQESDRGF GISRLCCILR GVDLKSVLFL LVIMPMCVLG  60
   61 VYINALKISY FLRPLWESPP KPFHEIPHYH HENASMESLC KLHGWRTREY PRRVYDAVLF 120
  121 STEVELLTIR WKELYPYVTQ FVLLESNSTF TGLPKPLVFA GHRDEFKFIE PRLTYGSIGG 180
  181 RFKKGEKNPF YEEAYQRIAL DQLLRIAGIT DDDLLIMSDV DEIPSRHTIN LLRWCDDIPQ 240
  241 ILHLRLKNYL YSFEFPVDDK SWRASVHRYQ TGKTRYAHYR QSDVILADSG WHCSFCFRRI 300
  301 SEFVFKMKAY SHYDRVRFAH YLNPKRVQRV ICSGSDLFDM IPEEYTFKDI IGKMGPIPHS 360
  361 YSAVHLPAYL LENAERYKFL LPGNCLRDEE

Type	Start	End	Confidence
Cytoplasmic	1	46	0.90
Transmembrane Helix	47	66	0.90
Non-Cytoplasmic	67	390	0.97