YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7263615, gi\|1...
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSCNSLGKL MNNGADNGAF LRDLASCSCR DLNLENLNMF LFVYTELINA DAEDASCSST  60
   61 PSWRIKKSLT STYADEKLQD LISDQWKNMG WQRKDPSTDF RGDGFISLEN LRFFAKTFSR 120
  121 LLKKQGGKRA AWEYPFAVAG VNITFMIMQM LDLEASKPRS FIRLVFLQML SESEWAFGLL 180
  181 YCVAFVVMDK QWLDKNATYM EFNDVLRYVQ GAA

Type	Start	End	Confidence
Cytoplasmic	1	129	0.78
Transmembrane Helix	130	151	0.71
Non-Cytoplasmic	152	173	0.79
Transmembrane Helix	174	188	0.56
Cytoplasmic	189	213	0.53