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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RIBRX_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSFRISSS SPLICRATLS NGDNSRNYHT TDAAFIRRAA DLSEMSAGLT SPHPNFGCVI  60
   61 ATSSGKVAGE GYLYAQGTKP AEALAVEAAG EFSRGATAYL NMEPGDCHGD HTAVSALVQA 120
  121 GIERVVVGIR HPLQHLRGSA IRELRSHGIE VNVLGEDFES KVLEDARKSC LLVNAPLIHR 180
  181 ACSRVPFSVL KYAMTLDGKI AASSGHAAWI SSKLSRTRVF ELRGGSDAVI VGGNTVRQDD 240
  241 PRLTARHGQG HTPTRIVMTQ SLDLPEKANL WDVSEVSTIV VTQRGARKSF QKLLASKGVE 300
  301 VVEFDMLNPR EVMEYFHLRG YLSILWECGG TLAASAISSS VIHKVVAFVA PKIIGGSKAP 360
  361 SPVGDLGMVE MTQALNLIDV CYEQVGPDML VSGFLQPIPD LLPVIPSEDA TVEIDPSVDP 420
  421 FEPSIIFFYK TWDLYGMWNI TIRYHTTVHV KWYLALSKKH NLLILHPKTL KANKFVGVEN 480
  481 PKAYDCVEKI RTARSPEEAA LIGRSTLRQK PELVRNDWED VKIEVMYKAL KCKFSTYPHL 540
  541 KSMLLSTIGT VLVEASPHDL FWGGGREGEG LNYLGRLLMQ LRSEYLGESS VSAEKTSSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle