YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HR3_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVSEIMAGA ALGLALQVLH DAIKKAKDRS LTTRCILDRL DATIFRITPL VTQVDKLSEE  60
   61 VEDSPRKVIE DLKHLLEKAV SLVEAYAELR RRNLLKKFRY KRRIKELEAS LRWMVDVDVQ 120
  121 VNQWVDIKEL MAKMSEMNTK LDEITRQPTD CICFKSNHST SQSSSQNIVE ETDRSLEEIV 180
  181 ECSSDGSKPK IDIHIHWSSR KRNKDREIRF VLK

Type	Start	End	Confidence
Signal Peptide	1	21	0.69
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	213	0.98