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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ARX_RAT
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNQYQEEGC SERPECKSKS PTLLSSYCID SILGRRSPCK MRLLGAAQSL PAPLASRTDQ  60
   61 EKAMQGSPKG SSAPFEAELH LPPKLRRLYG PGGGRLLQGA AAAAAAAAAA AAAAATATGT 120
  121 AGPRGEVPPP PPPAARPGER QDSAGAVAAA AAAAWDTLKI SQAPQVSISR SKSYRENGAP 180
  181 FVPPPPALDE LGGPGGVAHP EERLSAASGP GSAPAAGGGT GTEEDEEELL EDEEDEDEEE 240
  241 ELLEDDEEEL LEDDARALLK EPRRCSVATT GTVAAAAAAA AAAAAVATEG GELSPKEELL 300
  301 LHPEDAEGKD GEDSVCLSAG SDSEEGLLKR KQRRYRTTFT SYQLEELERA FQKTHYPDVF 360
  361 TREELAMRLD LTEARVQVWF QNRRAKWRKR EKAGAQTHPP GLPFPGPLSA THPLSPYLDA 420
  421 SPFPPHHPAL DSAWTAAAAA AAAAFPSLPP PPGSASLPPS GAPLGLSTFL GAAVFRHPAF 480
  481 ISPAFGRLFS TMAPLTSAST AAALLRQPTP AVEGAVASGA LADPATAAAD RRASSIAALR 540
  541 LKAKEHAAQL TQLNILPGTS TGKEVC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle