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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BGA10_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRVTTESIA STAILVVMVF LFSWRSIEAA NVSYDHRSLT IGNRRQLIIS AAIHYPRSVP  60
   61 AMWPSLVQTA KEGGCNAIES YVFWNGHEPS PGKYYFGGRY NIVKFIKIVQ QAGMHMILRI 120
  121 GPFVAAEWNY GGVPVWLHYV PGTVFRADNE PWKHYMESFT TYIVNLLKQE KLFAPQGGPI 180
  181 ILSQVENEYG YYEKDYGEGG KRYAQWSASM AVSQNIGVPW MMCQQWDAPP TVISTCNGFY 240
  241 CDQFTPNTPD KPKIWTENWP GWFKTFGGRD PHRPAEDVAY SVARFFGKGG SVHNYYMYHG 300
  301 GTNFGRTSGG PFITTSYDYE APIDEYGLPR LPKWGHLKDL HKAIMLSENL LISGEHQNFT 360
  361 LGHSLEADVY TDSSGTCAAF LSNLDDKNDK AVMFRNTSYH LPAWSVSILP DCKTEVFNTA 420
  421 KVTSKSSKVE MLPEDLKSSS GLKWEVFSEK PGIWGAADFV KNELVDHINT TKDTTDYLWY 480
  481 TTSITVSENE AFLKKGSSPV LFIESKGHTL HVFINKEYLG TATGNGTHVP FKLKKPVALK 540
  541 AGENNIDLLS MTVGLANAGS FYEWVGAGLT SVSIKGFNKG TLNLTNSKWS YKLGVEGEHL 600
  601 ELFKPGNSGA VKWTVTTKPP KKQPLTWYKV VIEPPSGSEP VGLDMISMGK GMAWLNGEEI 660
  661 GRYWPRIARK NSPNDECVKE CDYRGKFMPD KCLTGCGEPS QRWYHVPRSW FKSSGNELVI 720
  721 FEEKGGNPMK IKLSKRKVSV V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle