YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GT643_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVKSVRFSI WFLFVVTDLV FCRTLSGDPD PCDATNQREF QKLRSDQITV LINGYSEYRI  60
   61 PLLQTIVASY SSSSIVSSIL VLWGNPSTPD QLLDQLYQNL TQYSPGSASI SLIQQSSSSL 120
  121 NARFLPRSSV DTRAVLICDD DVEIDQRSLE FAFSVWKSNP DRLVGTFVRS HGFDLQGKEW 180
  181 IYTVHPDKYS IVLTKFMMMK QDYLFEYSCK GGVEMEEMRM IVDQMRNCED ILMNFVAADR 240
  241 LRAGPIMVGA ERVRDWGDAR NEEVEERVRD VGLSSRRVEH RKRRGNCIRE FHRVMGKMPL 300
  301 MYSYGKVVNS VGEQGLCRKA GKLVFCDRD

Type	Start	End	Confidence
Signal Peptide	1	22	0.84
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	329	0.97