YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25407567, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWGRKKPVS SSSSSGLSRA LPVSWFSKLS GSSDLKPAKE KKQDEKASQN ISVKTSLSST  60
   61 TRRSDIHENS KRFQRVSVEK ENSATRSADK ESNEKFEEIM SSVRKKVRDF QKETCGFLEV 120
  121 EAMDRDNGTV ILTPRIQVNR DKQRCERRDQ RLLEQKPKRS EQDAGVKVKK PARRTGTGGY 180
  181 SREDSVILGH TITKPAHQWE KLKEVKLREV KLKADQQRKS LYLKRELNRI GTKENNKVRV 240
  241 FSPRASEKCR VKAIEDLKKA KQRAREHELL IETADGGMEN ESFAVVKCSS DPQKDFRDSM 300
  301 IEMIMENGIN HPEELKELLV CYLRLNTDEY HDMIISVFQQ VHNDFNFH

Type	Start	End	Confidence
Signal Peptide	1	22	0.86
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	348	0.99