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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACCR1_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.62
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METRCSLLFL SLILLYLPKP GSGFGSSGPI AASFGGSAFF CAIDASGRQD VICWGKNYSS  60
   61 PSSPSSSSSS SSIASSTSAS YNIPSMAVLS GGDGFLCGIL SNTSQAFCFS SLGSSSGMDL 120
  121 VPLAYRTTAY SQIAAGNSHV CAVRGAYYSD HDSGTIDCWE ITRATNNNSL IAKENPNFYD 180
  181 QIVSNLVFNN IVSGDGFSCG GIRDGGMLCF GPNSSNLGFN TTSDNFQVLA AGKNSVCAIL 240
  241 NLSREVKCWG EDESFVNSPM NDSRFVSLTA GPRHFCGIRE DNHEVECWGN SNFSLIPKGS 300
  301 GFKAIASSDF IVCGIREEDL VLDCWMVNGS STLAYDPPLE LCSPGMCRAG PCNEKEFAFN 360
  361 ASILNEPDLT SLCVRKELMV CSPCGSDCSH GFFLSSSCTA NSDRICTPCS LCQNSSCSDI 420
  421 CKLHNSNFPD KHWHQLQRLV LIIGSCASAL LIIIIGCCVV PRIVTSPNKE DGAANQFKSC 480
  481 IGKPDLDTDQ PLENVSPAPS VTPFAQVFRL SELKDATNGF KEFNELGRGS YGFVYKAVLA 540
  541 DGRQVAVKRA NAATIIHTNT REFETELEIL CNIRHCNIVN LLGYSTEMGE RLLVYEYMPH 600
  601 GTLHDHLHSG FSPLSWSLRI KIAMQTAKGL EYLHNEAEPR IIHGDVKSSN VLLDSEWVAR 660
  661 VADFGLVTSS NEKNLDIKRD VYDFGVVLLE ILTGRKRYDR DCDPPEIVEW TVPVIREGKA 720
  721 AAIVDTYIAL PRNVEPLLKL ADVAELCVRE DPNQQPTMSE LANWLEHVAR DALIF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle